BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H12LP1|AL428300
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1204 1874 0.0
>3x_Contig1204
Length = 5869
Score = 1874 bits (944), Expect = 0.0
Identities = 963/968 (99%), Gaps = 2/968 (0%)
Strand = Plus / Plus
Query: 1 actcattataaagtcatgtaaatacagtaaaatctaatggaacacttgaacctctgccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2796 actcattataaagtcatgtaaatacagtaaaatctaatggaacacttgaacctctgccac 2855
Query: 61 ttggatatagttttcttaagcccaagaattgtctcggtttggggagatcgtttctgttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856 ttggatatagttttcttaagcccaagaattgtctcggtttggggagatcgtttctgttag 2915
Query: 121 accaatcgaattttgaatcatcaatggttattccactgttattcagctttattccggtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2916 accaatcgaattttgaatcatcaatggttattccactgttattcagctttattccggtcg 2975
Query: 181 tatcttgacttccttctattgtgaaatctccgacatctatttcagcagcatttgtgtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2976 tatcttgacttccttctattgtgaaatctccgacatctatttcagcagcatttgtgtaag 3035
Query: 241 ggttagtagattgagatggtcgactggcttcattaccagatgaaaaaagtctgtgtttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3036 ggttagtagattgagatggtcgactggcttcattaccagatgaaaaaagtctgtgtttga 3095
Query: 301 agaaaccttttgatgaggaactatttgtgcgttccacttgaggttgctgattttgttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 agaaaccttttgatgaggaactatttgtgcgttccacttgaggttgctgattttgttgaa 3155
Query: 361 gagattcctctgaggctgcgggtggaggtggtggagctttggcagagggaaatgaagcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3156 gagattcctctgaggctgcgggtggaggtggtggagctttggcagagggaaatgaagcgg 3215
Query: 421 cttgtggaggaggggaaggaggagccgttggcgcacccactggtgtatgactattctcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3216 cttgtggaggaggggaaggaggagccgttggcgcacccactggtgtatgactattctcac 3275
Query: 481 tttcgataatgtgagaatcatcccttctgctttgtattgatgccagaaatggtaatcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3276 tttcgataatgtgagaatcatcccttctgctttgtattgatgccagaaatggtaatcctc 3335
Query: 541 cggctggaatagatggtgcttcagaacttggggtagattgaggcagcgtaggtgcattaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3336 cggctggaatagatggtgcttcagaacttggggtagattgaggcagcgtaggtgcattaa 3395
Query: 601 aggaaggagtaggtggggccggaggggcaggaggggcaggaggtgcaggaggtgcaggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 aggaaggagtaggtggggccggaggggcaggaggggcaggaggtgcaggaggtgcaggag 3455
Query: 661 ccggtggggccggaggagcagcaattgaaggtggagcagcaggagctggagttggtggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 ccggtggggccggaggagcagcaattgaaggtggagcagcaggagctggagttggtggaa 3515
Query: 721 -cgaagamgcactgaacgaaggaggagccggaggagcagatgatgagggaagcggtacct 779
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3516 ccgaaggagcactgaacgaaggaggagccggaggagcagatgatgagggaagcggtacct 3575
Query: 780 ttggagcggaagatgctgtattattcgacgcaccatgtcctgttccttcaactacgaatc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3576 ttggagcggaagatgctgtattattcgacgcaccatgtcctgttccttcaactacgaatc 3635
Query: 840 tgtcatctctctttcgttgaatctccgccaggaatggaagt-ctccagctggggacggtg 898
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3636 tgtcatctctctttcgttgaatctccgccaggaatggaagtcctccagctggggacggtg 3695
Query: 899 cagatggtggtggttgcggcgtggacgttgggaatgatatgcttggaggtgcaggtkggg 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3696 cagatggtggtggttgcggcgtggacgttgggaatgatatgcttggaggtgcaggtgggg 3755
Query: 959 ctgcagga 966
||||||||
Sbjct: 3756 ctgcagga 3763
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5673
Number of Sequences: 1807
Number of extensions: 5673
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)